Protein Science
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


This Article
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by RICHARDSON, D. C.
Right arrow Articles by RICHARDSON, J. S.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by RICHARDSON, D. C.
Right arrow Articles by RICHARDSON, J. S.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

Protein Science, Vol 1, Issue 1 3-9, Copyright © 1992 by Cold Spring Harbor Laboratory Press


KINEMAGE

The kinemage: A tool for scientific communication

D. C. RICHARDSON and J. S. RICHARDSON
Little River Institute, 5820 Old Stony Way, Durham, North Carolina 27705; and Department of Biochemistry, Duke University, Durham, North Carolina 27710

A "kinemage" (kinetic image) is a scientific illustration presented as an interactive computer display. Operations on the displayed kinemage respond within a fraction of a second: the entire image can be rotated in real time, parts of the display can be turned on or off, points can be identified by selecting them, and the change between different forms can be animated. A kinemage is prepared and specified by the author(s) of a journal article, in order to better communicate ideas that depend on three-dimensional information. The kinemages are distributed as plain text files of commented display lists and accompanying explanations. They are viewed and explored in an open-ended way by the reader using a simple graphics program, such as the one described here (called MAGE), which presently runs on Macintosh computers. A utility (called PREKIN) helps authors prepare the kinemages. Kinemages are being implemented under the auspices of the Innovative Technology Fund.
Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
RNAHome page
J. S. Richardson, B. Schneider, L. W. Murray, G. J. Kapral, R. M. Immormino, J. J. Headd, D. C. Richardson, D. Ham, E. Hershkovits, L. D. Williams, et al.
RNA backbone: Consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution)
RNA, March 1, 2008; 14(3): 465 - 481.
[Abstract] [Full Text] [PDF]


Home page
Field MethodsHome page
R. DeJordy, S. P. Borgatti, C. Roussin, and D. S. Halgin
Visualizing Proximity Data
Field Methods, August 1, 2007; 19(3): 239 - 263.
[Abstract] [PDF]


Home page
Protein Sci.Home page
J. Hoskins, S. Lovell, and T. L. Blundell
An algorithm for predicting protein-protein interaction sites: Abnormally exposed amino acid residues and secondary structure elements.
Protein Sci., May 1, 2006; 15(5): 1017 - 1029.
[Abstract] [Full Text] [PDF]


Home page
Biophys. JHome page
L. Zhang and D. Morikis
Immunophysical Properties and Prediction of Activities for Vaccinia Virus Complement Control Protein and Smallpox Inhibitor of Complement Enzymes Using Molecular Dynamics and Electrostatics
Biophys. J., May 1, 2006; 90(9): 3106 - 3119.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
S. SMIT, M. YARUS, and R. KNIGHT
Natural selection is not required to explain universal compositional patterns in rRNA secondary structure categories
RNA, January 1, 2006; 12(1): 1 - 14.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
R. Knight, H. De Sterck, R. Markel, S. Smit, A. Oshmyansky, and M. Yarus
Abundance of correctly folded RNA motifs in sequence space, calculated on computational grids
Nucleic Acids Res., October 19, 2005; 33(18): 5924 - 5935.
[Abstract] [Full Text] [PDF]


Home page
Journal of Social and Personal RelationshipsHome page
T. Igarashi, J. Takai, and T. Yoshida
Gender differences in social network development via mobile phone text messages: A longitudinal study
Journal of Social and Personal Relationships, October 1, 2005; 22(5): 691 - 713.
[Abstract] [PDF]


Home page
J. Biol. Chem.Home page
J. A. Gibbons, D. C. Weiser, and S. Shenolikar
Importance of a Surface Hydrophobic Pocket on Protein Phosphatase-1 Catalytic Subunit in Recognizing Cellular Regulators
J. Biol. Chem., April 22, 2005; 280(16): 15903 - 15911.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
I. W. Davis, L. W. Murray, J. S. Richardson, and D. C. Richardson
MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes
Nucleic Acids Res., July 1, 2004; 32(suppl_2): W615 - W619.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
L. J. W. Murray, W. B. Arendall III, D. C. Richardson, and J. S. Richardson
RNA backbone is rotameric
PNAS, November 25, 2003; 100(24): 13904 - 13909.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
T. Komiyama, B. VanderLugt, M. Fugere, R. Day, R. J. Kaufman, and R. S. Fuller
Optimization of protease-inhibitor interactions by randomizing adventitious contacts
PNAS, July 8, 2003; 100(14): 8205 - 8210.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
J. S. Richardson and D. C. Richardson
Natural beta -sheet proteins use negative design to avoid edge-to-edge aggregation
PNAS, March 5, 2002; 99(5): 2754 - 2759.
[Abstract] [Full Text] [PDF]


Home page
Protein Eng Des SelHome page
W. Parker, A. Sood, and A. Song
Organization of regions with amphiphilic {{alpha}}-helical potential within the three-dimensional structure of {beta}-sheet proteins
Protein Eng. Des. Sel., May 1, 2001; 14(5): 315 - 319.
[Abstract] [Full Text] [PDF]


Home page
J. Am. Med. Inform. Assoc.Home page
R. O. Chen and R. B. Altman
Automated Diagnosis of Data-Model Conflicts Using Metadata
J. Am. Med. Inform. Assoc., September 1, 1999; 6(5): 374 - 392.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
S. C. Lovell, J. M. Word, J. S. Richardson, and D. C. Richardson
Asparagine and glutamine rotamers: B-factor cutoff and correction of amide flips yield distinct clustering
PNAS, January 19, 1999; 96(2): 400 - 405.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
R. T. Richardson and M. G. O'Rand
Site-directed Mutagenesis of Rabbit Proacrosin. IDENTIFICATION OF RESIDUES INVOLVED IN ZONA PELLUCIDA BINDING
J. Biol. Chem., September 27, 1996; 271(39): 24069 - 24074.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Copyright © 1992 by The Protein Society.