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from Methanobacterium thermoautotrophicum: Implications for translation initiation
1 McGill University, Department of Biochemistry, McIntyre Medical Science Building, Montréal, Québec H3G 1Y6, Canada
2 Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 2M9, Canada
3 Ontario Cancer Institute, Toronto, Ontario M5G 2M9, Canada
4 Montreal Joint Centre for Structural Biology, Montréal, Québec, Canada
(RECEIVED November 4, 2003; FINAL REVISION December 1, 2003; ACCEPTED December 1, 2003)
is the archaeal homolog of eIF2
, a member of the eIF2 heterotrimeric complex, implicated in the delivery of Met-tRNAiMet to the 40S ribosomal subunit. We have determined the solution structure of the intact
-subunit of aIF2 from Methanobacterium thermoautotrophicum. aIF2
is composed of an unfolded N terminus, a mixed
/
core domain and a C-terminal zinc finger. NMR data shows the two folded domains display restricted mobility with respect to each other. Analysis of the aIF2
structure docked to tRNA allowed the identification of a putative binding site for the
-subunit in the ternary translation complex. Based on structural similarity and biochemical data, a role for the different secondary structure elements is suggested.
Keywords: aIF2
; translation initiation; archaebacteria; NMR
Reprint requests to: Kalle Gehring, McGill University, Department of Biochemistry, McIntyre Medical Science Building, 3655 Promenade Sir William Osler, Montréal, Québec H3G 1Y6, Canada; e-mail: Kalle. Gehring{at}mcgill.ca; fax: (514) 398-7384.
Article and publication are at http://www.proteinscience.org/cgi/doi/10.1110/ps.03506604.
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