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Published online before print March 31, 2005, 10.1110/ps.041184105
Protein Science (2005), 14:1274-1281. Published by Cold Spring Harbor Laboratory Press. Copyright © 2005 The Protein Society
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The crystal structure of a partial mouse Notch-1 ankyrin domain: Repeats 4 through 7 preserve an ankyrin fold

Olga Y. Lubman1, Raphael Kopan1, Gabriel Waksman2 and Sergey Korolev3

1 Department of Molecular Biology and Pharmacology and the Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63110, USA2 Institute of Structural Molecular Biology, Birkbeck and University College London, London, WC1E 7HX, United Kingdom3 Edward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, Missouri 63130, USA

(RECEIVED October 22, 2004; FINAL REVISION January 21, 2005; ACCEPTED January 26, 2005)

Folding and stability of proteins containing ankyrin repeats (ARs) is of great interest because they mediate numerous protein–protein interactions involved in a wide range of regulatory cellular processes. Notch, an ankyrin domain containing protein, signals by converting a transcriptional repression complex into an activation complex. The Notch ANK domain is essential for Notch function and contains seven ARs. Here, we present the 2.2 Å crystal structure of ARs 4–7 from mouse Notch 1 (m1ANK). These C-terminal repeats were resistant to degradation during crystallization, and their secondary and tertiary structures are maintained in the absence of repeats 1–3. The crystallized fragment adopts a typical ankyrin fold including the poorly conserved seventh AR, as seen in the Drosophila Notch ANK domain (dANK). The structural preservation and stability of the C-terminal repeats shed a new light onto the mechanism of hetero-oligomeric assembly during Notch-mediated transcriptional activation.

Keywords: ankyrin repeats; Notch; crystal structure

Article published online ahead of print. Article and publication date are at http://www.proteinscience.org/cgi/doi/10.1110/ps.041184105.


Reprint requests to: Sergey Korolev, Saint Louis University School of Medicine, Edward A. Doisy Department of Biochemistry and Molecular Biology, St. Louis, MO 63130, USA; e-mail: korolevs{at}slu.edu; fax: (314) 977-9205.


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