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Published online before print May 9, 2005, 10.1110/ps.041285605
Protein Science (2005), 14:1396-1409. Published by Cold Spring Harbor Laboratory Press. Copyright © 2005 The Protein Society
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p25{alpha} is flexible but natively folded and binds tubulin with oligomeric stoichiometry

Daniel E. Otzen1, Ditte M.S. Lundvig2, Reinhard Wimmer1, Lotte H. Nielsen2, Jakob R. Pedersen1 and Poul H. Jensen2

1 Department of Life Sciences, Aalborg University, DK-9000 Aalborg, Denmark
2 Institute of Medical Biochemistry, Aarhus University, DK-8000 Aarhus, Denmark

(RECEIVED December 10, 2004; FINAL REVISION March 2, 2005; ACCEPTED March 9, 2005)

p25{alpha} is a 219-residue proteinwhich stimulates aberrant tubulin polymerization and is implicated in a variety of other functions. The protein has unusual secondary structure involving significant amounts of random coil, and binding to microtubules is accompanied by a large structural change, suggesting a high degree of plasticity. p25{alpha} has been proposed to be natively unfolded, so that folding is coupled to interaction with its physiological partners. Here we show that recombinant human p25{alpha} is folded under physiological conditions, since it has a well structured and solvent-sequestered aromatic environment and considerable chemical shift dispersion of amide and aliphatic protons. With increasing urea concentrations, p25{alpha} undergoes clear spectral changes suggesting significant loss of structure. p25{alpha} unfolds cooperatively in urea according to a simple two-state transition with a stability in water of ~5 kcal/mol. The protein behaves as a monomer and refolds with a transient on-pathway folding intermediate. However, high sensitivity to proteolytic attack and abnormal gel filtration migration behavior suggests a relatively extended structure, possibly organized in distinct domains. A deletion mutant of p25{alpha} lacking residues 3–43 also unfolds cooperatively and with similar stability, suggesting that the N-terminal region is largely unstructured. Both proteins undergo significant loss of structure when bound to monomeric tubulin. The stoichiometry of binding is estimated to be 3–4 molecules of tubulin per p25{alpha} and is not significantly affected by the deletion of residues 3–43. In conclusion, we dismiss the proposal that p25{alpha} is natively unfolded, although the protein is relatively flexible. This flexibility may be linked to its tubulin-binding properties.

Keywords: natively unfolded protein; stability; folding kinetics; tubulin; flexibility; binding stoichiometry

Abbreviations: ANS, 8-anilino-1-naphthalene-sulfonic acid • C, off-pathway intermediate • D, denatured state • I, on-pathway intermediate • N, native state

Article published online ahead of print. Article and publication date are at http://www.proteinscience.org/cgi/doi/10.1110/ps.041285605.


Reprint requests to: Daniel E. Otzen, Dept. of Life Sciences, Aalborg University, Sohngaardsholmsvej 49, DK-9000 Aalborg, Denmark; e-mail: dao{at}bio.aau.dk; fax: +45-98-14-18-08.


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