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Published online before print October 26, 2007, 10.1110/ps.073157507
Protein Science (2007), 16:2756-2760. Published by Cold Spring Harbor Laboratory Press. Copyright © 2007 The Protein Society
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PROTEIN STRUCTURE REPORT

Atomic-resolution crystal structure of the antiviral lectin scytovirin

Tinoush Moulaei1, Istvan Botos1,5, Natasza E. Ziólkowska1,6, Heidi R. Bokesch2,3, Lauren R. Krumpe2,3, Tawnya C. McKee2, Barry R. O'Keefe2, Zbigniew Dauter4, and Alexander Wlodawer1

1 Protein Structure Section, Macromolecular Crystallography Laboratory, National Cancer Institute, NCI-Frederick, Frederick, Maryland 21702-1201, USA
2 Molecular Targets Development Program, Center for Cancer Research, National Cancer Institute, NCI-Frederick, Frederick, Maryland 21702-1201, USA
3 SAIC-Frederick Inc., National Cancer Institute, Frederick, Maryland 21702-1201, USA
4 Synchrotron Radiation Research Section, Macromolecular Crystallography Laboratory, National Cancer Institute, Argonne National Laboratory, Argonne, Illinois 60439, USA

(RECEIVED August 2, 2007; FINAL REVISION September 6, 2007; ACCEPTED September 7, 2007)

The crystal structures of the natural and recombinant antiviral lectin scytovirin (SVN) were solved by single-wavelength anomalous scattering and refined with data extending to 1.3 Å and 1.0 Å resolution, respectively. A molecule of SVN consists of a single chain 95 amino acids long, with an almost perfect sequence repeat that creates two very similar domains (RMS deviation 0.25 Å for 40 pairs of C{alpha} atoms). The crystal structure differs significantly from a previously published NMR structure of the same protein, with the RMS deviations calculated separately for the N- and C-terminal domains of 5.3 Å and 3.7 Å, respectively, and a very different relationship between the two domains. In addition, the disulfide bonding pattern of the crystal structures differs from that described in the previously published mass spectrometry and NMR studies.

Keywords: lectins; new fold; anomalous scattering; scytovirin



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