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Protein Science (2007), 16:535-538. Published by Cold Spring Harbor Laboratory Press. Copyright © 2007 The Protein Society
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PROTEIN STRUCTURE REPORT

Crystal structure of AGR_C_4470p from Agrobacterium tumefaciens

Sergey M. Vorobiev1, Helen Neely1, Jayaraman Seetharaman1, Li-Chung Ma2, Rong Xiao2, Thomas B. Acton2, Gaetano T. Montelione2, and Liang Tong1

1 Department of Biological Sciences, Northeast Structural Genomics Consortium, Columbia University, New York, New York 10027, USA
2 Center for Advanced Biotechnology and Medicine, Department of Molecular Biology and Biochemistry, Rutgers University, Department of Biochemistry, Robert Wood Johnson Medical School, Northeast Structural Genomics Consortium, Piscataway, New Jersey 08854, USA

(RECEIVED November 10, 2006; FINAL REVISION December 7, 2006; ACCEPTED December 12, 2006)

We report here the crystal structure at 2.0 Å resolution of the AGR_C_4470p protein from the Gram-negative bacterium Agrobacterium tumefaciens. The protein is a tightly associated dimer, each subunit of which bears strong structural homology with the two domains of the heme utilization protein ChuS from Escherichia coli and HemS from Yersinia enterocolitica. Remarkably, the organization of the AGR_C_4470p dimer is the same as that of the two domains in ChuS and HemS, providing structural evidence that these two proteins evolved by gene duplication. However, the binding site for heme, while conserved in HemS and ChuS, is not conserved in AGR_C_4470p, suggesting that it probably has a different function. This is supported by the presence of two homologs of AGR_C_4470p in E. coli, in addition to the ChuS protein.

Keywords: protein structure; structural genomics; heme utilization enzyme; HemS; ChuS; molecular evolution; gene duplication



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