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Structural factors affecting the choice between latency transition and polymerization in inhibitory serpins

Department of Molecular Biology, Sejong University, Seoul 143-747, Korea

(RECEIVED December 21, 2006; FINAL REVISION January 31, 2007; ACCEPTED February 1, 2007)

Plasminogen activator inhibitor-1 (PAI-1), a member of the serine protease inhibitor (serpin) protein family, is unique among the serpins in its conformational lability. This lability allows spontaneous conversion of the active form to a more stable, latent conformation under physiological conditions. In other serpins, polymerization, rather than latency transition, is induced under pathological conditions or upon heat treatment. To identify specific factors promoting latency conversion in PAI-1, we mutated PAI-1 at various positions and compared the effects with those of equivalent mutations in ₁-antitrypsin, the archetypal serpin. Mutations that improved interactions with the turn between helix F and the third strand of -sheet A (thFs3A) or the fifth strand of -sheet A (s5A), which are near the site of latency transition-associated insertion of the reactive center loop, retarded latency conversion but did not greatly increase structural stability. Mutations that decreased interactions with s2C facilitated conformational conversion, possibly by releasing the reactive center loop from -sheet C. Mutations of Thr93 that filled a hydrophobic surface pocket on s2A dramatically increased structural stability but had a negligible effect on the conformational transition. Our results suggest that the structural features controlling latency transition in PAI-1 are highly localized, whereas the conformational strain of the native forms of other inhibitory serpins is distributed throughout the molecule and induces polymerization.

Keywords: ₁-antitrypsin; kinetic trap; latency transition; plasminogen activator inhibitor-1; polymerization; protein folding; serine protease inhibitors

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