|
|
||||||||
Protein Science, Vol 9, Issue 6 1045-1052, Copyright © 2000 by The Protein Society
S Ha, D Walker, Y Shi and S Walker
Department of Chemistry, Princeton University, New Jersey 08544, USA.
The 1.9 A X-ray structure of a membrane-associated glycosyltransferase involved in peptidoglycan biosynthesis is reported. This enzyme, MurG, contains two alpha/beta open sheet domains separated by a deep cleft. Structural analysis suggests that the C-terminal domain contains the UDP-GlcNAc binding site while the N-terminal domain contains the acceptor binding site and likely membrane association site. Combined with sequence data from other MurG homologs, this structure provides insight into the residues that are important in substrate binding and catalysis. We have also noted that a conserved region found in many UDP- sugar transferases maps to a beta/alpha/beta/alpha supersecondary structural motif in the donor binding region of MurG, an observation that may be helpful in glycosyltransferase structure prediction. The identification of a conserved structural motif involved in donor binding in different UDP-sugar transferases also suggests that it may be possible to identify--and perhaps alter--the residues that help determine donor specificity.
This article has been cited by other articles:
![]() |
X.-D. Gao, S. Moriyama, N. Miura, N. Dean, and S.-I. Nishimura Interaction between the C Termini of Alg13 and Alg14 Mediates Formation of the Active UDP-N-acetylglucosamine Transferase Complex J. Biol. Chem., November 21, 2008; 283(47): 32534 - 32541. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Barreras, S. R. Salinas, P. L. Abdian, M. A. Kampel, and L. Ielpi Structure and Mechanism of GumK, a Membrane-associated Glucuronosyltransferase J. Biol. Chem., September 5, 2008; 283(36): 25027 - 25035. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. van Heijenoort Lipid Intermediates in the Biosynthesis of Bacterial Peptidoglycan Microbiol. Mol. Biol. Rev., December 1, 2007; 71(4): 620 - 635. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Averbeck, S. Keppler-Ross, and N. Dean Membrane Topology of the Alg14 Endoplasmic Reticulum UDP-GlcNAc Transferase Subunit J. Biol. Chem., October 5, 2007; 282(40): 29081 - 29088. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Berg, D. Kaur, M. Jackson, and P. J Brennan The glycosyltransferases of Mycobacterium tuberculosis--roles in the synthesis of arabinogalactan, lipoarabinomannan, and other glycoconjugates Glycobiology, June 1, 2007; 17(6): 35R - 56R. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. N. Bolam, S. Roberts, M. R. Proctor, J. P. Turkenburg, E. J. Dodson, C. Martinez-Fleites, M. Yang, B. G. Davis, G. J. Davies, and H. J. Gilbert The crystal structure of two macrolide glycosyltransferases provides a blueprint for host cell antibiotic immunity PNAS, March 27, 2007; 104(13): 5336 - 5341. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. C. Hardin, K. A. Duncan, and S. C. Huber Determination of Structural Requirements and Probable Regulatory Effectors for Membrane Association of Maize Sucrose Synthase 1 Plant Physiology, July 1, 2006; 141(3): 1106 - 1119. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. Breton, L. Snajdrova, C. Jeanneau, J. Koca, and A. Imberty Structures and mechanisms of glycosyltransferases Glycobiology, February 1, 2006; 16(2): 29R - 37R. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Shao, X. He, L. Achnine, J. W. Blount, R. A. Dixon, and X. Wang Crystal Structures of a Multifunctional Triterpene/Flavonoid Glycosyltransferase from Medicago truncatula PLANT CELL, November 1, 2005; 17(11): 3141 - 3154. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. Bickel, L. Lehle, M. Schwarz, M. Aebi, and C. A. Jakob Biosynthesis of Lipid-linked Oligosaccharides in Saccharomyces cerevisiae: Alg13p AND Alg14p FORM A COMPLEX REQUIRED FOR THE FORMATION OF GlcNAc2-PP-DOLICHOL J. Biol. Chem., October 14, 2005; 280(41): 34500 - 34506. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. Botte, C. Jeanneau, L. Snajdrova, O. Bastien, A. Imberty, C. Breton, and E. Marechal Molecular Modeling and Site-directed Mutagenesis of Plant Chloroplast Monogalactosyldiacylglycerol Synthase Reveal Critical Residues for Activity J. Biol. Chem., October 14, 2005; 280(41): 34691 - 34701. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. P. Price and F. A. Momany Modeling bacterial UDP-HexNAc: polyprenol-P HexNAc-1-P transferases Glycobiology, September 1, 2005; 15(9): 29R - 42R. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. D. Hurley, S. Stout, E. Miner, J. Zhou, and P. J. Roach Requirements for Catalysis in Mammalian Glycogenin J. Biol. Chem., June 24, 2005; 280(25): 23892 - 23899. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Ravishankar, V. P. Kumar, B. Chandrakala, R. K. Jha, S. M. Solapure, and S. M. de Sousa Scintillation Proximity Assay for Inhibitors of Escherichia coli MurG and, Optionally, MraY Antimicrob. Agents Chemother., April 1, 2005; 49(4): 1410 - 1418. [Abstract] [Full Text] [PDF] |
||||
![]() |
I. Chantret, J. Dancourt, A. Barbat, and S. E. H. Moore Two Proteins Homologous to the N- and C-terminal Domains of the Bacterial Glycosyltransferase Murg Are Required for the Second Step of Dolichyl-linked Oligosaccharide Synthesis in Saccharomyces cerevisiae J. Biol. Chem., March 11, 2005; 280(10): 9236 - 9242. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Garavaglia, N. Raffaelli, L. Finaurini, G. Magni, and M. Rizzi A Novel Fold Revealed by Mycobacterium tuberculosis NAD Kinase, a Key Allosteric Enzyme in NADP Biosynthesis J. Biol. Chem., September 24, 2004; 279(39): 40980 - 40986. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. L. Rosen, M. Edman, M. Sjostrom, and A. Wieslander Recognition of Fold and Sugar Linkage for Glycosyltransferases by Multivariate Sequence Analysis J. Biol. Chem., September 10, 2004; 279(37): 38683 - 38692. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Duclos, P. Da Silva, F. Vovelle, F. Piller, and V. Piller Characterization of the UDP-N-acetylgalactosamine binding domain of bovine polypeptide {alpha}N-acetylgalactosaminyltransferase T1 Protein Eng. Des. Sel., August 1, 2004; 17(8): 635 - 646. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Barreras, P. L. Abdian, and L. Ielpi Functional characterization of GumK, a membrane-associated {beta}-glucuronosyltransferase from Xanthomonas campestris required for xanthan polysaccharide synthesis Glycobiology, March 1, 2004; 14(3): 233 - 241. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. P. Gibson, C. A. Tarling, S. Roberts, S. G. Withers, and G. J. Davies The Donor Subsite of Trehalose-6-phosphate Synthase: BINARY COMPLEXES WITH UDP-GLUCOSE AND UDP-2-DEOXY-2-FLUORO-GLUCOSE AT 2 A RESOLUTION J. Biol. Chem., January 16, 2004; 279(3): 1950 - 1955. [Abstract] [Full Text] [PDF] |
||||
![]() |
Z. Zhang, S. Kochhar, and M. Grigorov Exploring the sequence-structure protein landscape in the glycosyltransferase family Protein Sci., October 1, 2003; 12(10): 2291 - 2302. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. Jing and P. L. DeAngelis Analysis of the two active sites of the hyaluronan synthase and the chondroitin synthase of Pasteurella multocida Glycobiology, October 1, 2003; 13(10): 661 - 671. [Abstract] [Full Text] [PDF] |
||||
![]() |
O. L. Franco and D. J. Rigden Fold recognition analysis of glycosyltransferase families: further members of structural superfamilies Glycobiology, October 1, 2003; 13(10): 707 - 712. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. M. Mulichak, H. C. Losey, W. Lu, Z. Wawrzak, C. T. Walsh, and R. M. Garavito Structure of the TDP-epi-vancosaminyltransferase GtfA from the chloroeremomycin biosynthetic pathway PNAS, August 5, 2003; 100(16): 9238 - 9243. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Handa, T. Terada, Y. Kamewari, H. Hamana, J. R.H. Tame, S.-Y. Park, K. Kinoshita, M. Ota, H. Nakamura, S. Kuramitsu, et al. Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8 Protein Sci., August 1, 2003; 12(8): 1621 - 1632. [Abstract] [Full Text] [PDF] |
||||
![]() |
I. Tvaroska, I. Andre, and J. P. Carver Catalytic mechanism of the inverting N-acetylglucosaminyltransferase I: DFT quantum mechanical model of the reaction pathway and determination of the transition state structure Glycobiology, August 1, 2003; 13(8): 559 - 566. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. van den Brink-van der Laan, J.-W. P. Boots, R. E. J. Spelbrink, G. M. Kool, E. Breukink, J. A. Killian, and B. de Kruijff Membrane Interaction of the Glycosyltransferase MurG: a Special Role for Cardiolipin J. Bacteriol., July 1, 2003; 185(13): 3773 - 3779. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Liu and A. Mushegian Three monophyletic superfamilies account for the majority of the known glycosyltransferases Protein Sci., July 1, 2003; 12(7): 1418 - 1431. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. Breukink, H. E. van Heusden, P. J. Vollmerhaus, E. Swiezewska, L. Brunner, S. Walker, A. J. R. Heck, and B. de Kruijff Lipid II Is an Intrinsic Component of the Pore Induced by Nisin in Bacterial Membranes J. Biol. Chem., May 23, 2003; 278(22): 19898 - 19903. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Edman, S. Berg, P. Storm, M. Wikstrom, S. Vikstrom, A. Ohman, and A. Wieslander Structural Features of Glycosyltransferases Synthesizing Major Bilayer and Nonbilayer-prone Membrane Lipids in Acholeplasma laidlawii and Streptococcus pneumoniae J. Biol. Chem., February 28, 2003; 278(10): 8420 - 8428. [Abstract] [Full Text] [PDF] |
||||
![]() |
Y. Hu, L. Chen, S. Ha, B. Gross, B. Falcone, D. Walker, M. Mokhtarzadeh, and S. Walker Crystal structure of the MurG:UDP-GlcNAc complex reveals common structural principles of a superfamily of glycosyltransferases PNAS, February 4, 2003; 100(3): 845 - 849. [Abstract] [Full Text] [PDF] |
||||
![]() |
V. Chazalet, K. Uehara, R. A. Geremia, and C. Breton Identification of Essential Amino Acids in the Azorhizobium caulinodans Fucosyltransferase NodZ J. Bacteriol., December 15, 2001; 183(24): 7067 - 7075. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. J. Keenleyside, A. J. Clarke, and C. Whitfield Identification of Residues Involved in Catalytic Activity of the Inverting Glycosyl Transferase WbbE from Salmonella enterica Serovar Borreze J. Bacteriol., January 1, 2001; 183(1): 77 - 85. [Abstract] [Full Text] |
||||
![]() |
P. L. Abdian, A. C. Lellouch, C. Gautier, L. Ielpi, and R. A. Geremia Identification of Essential Amino Acids in the Bacterial alpha -Mannosyltransferase AceA J. Biol. Chem., December 15, 2000; 275(51): 40568 - 40575. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Berg, M. Edman, L. Li, M. Wikstrom, and A. Wieslander Sequence Properties of the 1,2-Diacylglycerol 3-Glucosyltransferase from Acholeplasma laidlawii Membranes. RECOGNITION OF A LARGE GROUP OF LIPID GLYCOSYLTRANSFERASES IN EUBACTERIA AND ARCHAEA J. Biol. Chem., June 15, 2001; 276(25): 22056 - 22063. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. L. Marks, M. Dominguez, K. Wu, and R. E. Pagano Identification of Active Site Residues in Glucosylceramide Synthase. A NUCLEOTIDE-BINDING/CATALYTIC MOTIF CONSERVED WITH PROCESSIVE beta -GLYCOSYLTRANSFERASES J. Biol. Chem., July 6, 2001; 276(28): 26492 - 26498. [Abstract] [Full Text] [PDF] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |