Constraints on the conformation of the cytoplasmic face of dark-adapted and light-excited rhodopsin inferred from antirhodopsin antibody imprints
Protein Sci
Bailey et al. 12 (11): 2453.
Supplemental Research Data
Files in this Data Supplement:
MS Excel File (121 KB)
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Highest scoring FINDMAP epitope mappings for five anti-rhodopsin mAbs listed in Table 2 of the text, but not included in Table 4. Additional applicable information can be found in the caption of Table 4.
MS Excel File (62 KB)
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This table is an expanded version of text Table 5, showing the distance constraints for five additional anti-rhodopsin mAbs, and including the individual mapping identification numbers for the mappings grouped in text Table 4 and in Electronic Appendix Table 1. Substitution scoring is based on the amino acid substitution scoring matrix in Table 3 and the substitution score for each site is illustrated by the color scheme. Average local substitution scores were obtained by calculating the mapping scores for the single residue mapped on both sides of the distance proximity constraint gap in the rhodopsin primary amino acid sequence. Average block substitution scores indicate the substitution
fidelity of all residues on both sides of a gap up to the next gap or the end of the sequence.