EDITORIALS:

Mark Hermodson

The Open Access Debate
Protein Sci 2004 13: 2569-2570. [Full Text]  

OBITUARY:

P. Balaram

Anil Lala (1950–2004)
Protein Sci 2004 13: 2571-2572. [Full Text]  

ACCELERATED COMMUNICATIONS:

Patricia C. Abad, I. Saira Mian, Cedric Plachot, Aniysha Nelpurackal, Carol Bator-Kelly, and Sophie A. Lelièvre

The C terminus of the nuclear protein NuMA: Phylogenetic distribution and structure
Protein Sci 2004 13: 2573-2577. [Abstract] [Full Text]  

ARTICLES:

John T. Bahns, Chin-Mei Liu, and Liaohai Chen

Characterizing specific phage–protein interactions by fluorescence correlation spectroscopy
Protein Sci 2004 13: 2578-2587. [Abstract] [Full Text]  

Timothy A. Hinsley, Pamela Cunliffe, Hannah J. Tipney, Andrew Brass, and May Tassabehji

Comparison of TFII-I gene family members deleted in Williams-Beuren syndrome
Protein Sci 2004 13: 2588-2599. [Abstract] [Full Text]  

Andrei L. Lomize, I.D. Pogozheva, and H.I. Mosberg

Quantification of helix–helix binding affinities in micelles and lipid bilayers
Protein Sci 2004 13: 2600-2612. Published in Advance August 31, 2004, 10.1110/ps.04850804 [Abstract] [Full Text]  

Ken Sale, Jean-Loup Faulon, Genetha A. Gray, Joseph S. Schoeniger, and Malin M. Young

Optimal bundling of transmembrane helices using sparse distance constraints
Protein Sci 2004 13: 2613-2627. Published in Advance August 31, 2004, 10.1110/ps.04781504 [Abstract] [Full Text]  

Anders Sandberg, Johan Leckner, and B. Göran Karlsson

Apo-azurin folds via an intermediate that resembles the molten-globule
Protein Sci 2004 13: 2628-2638. [Abstract] [Full Text]  

Matthew B. Seefeldt, Jun Ouyang, Wayne A. Froland, John F. Carpenter, and Theodore W. Randolph

High-pressure refolding of bikunin: Efficacy and thermodynamics
Protein Sci 2004 13: 2639-2650. [Abstract] [Full Text]  

Michael J. Behe and David W. Snoke

Simulating evolution by gene duplication of protein features that require multiple amino acid residues
Protein Sci 2004 13: 2651-2664. Published in Advance August 31, 2004, 10.1110/ps.04802904 [Abstract] [Full Text]  

Yuan Cheng, Sonia M. Sequeira, Lucy Malinina, Valentina Tereshko, Thomas H. Söllner, and Dinshaw J. Patel

Crystallographic identification of Ca²⁺ and Sr²⁺ coordination sites in synaptotagmin I C₂B domain
Protein Sci 2004 13: 2665-2672. Published in Advance August 31, 2004, 10.1110/ps.04832604 [Abstract] [Full Text]  

Zhihong Cheng, Yuying Liu, Chernhoe Wang, Roy Parker, and Haiwei Song

Crystal structure of Ski8p, a WD-repeat protein with dual roles in mRNA metabolism and meiotic recombination
Protein Sci 2004 13: 2673-2684. Published in Advance August 31, 2004, 10.1110/ps.04856504 [Abstract] [Full Text]  

Kyung H. Choi, James M. Groarke, Dorothy C. Young, Michael G. Rossmann, Daniel C. Pevear, Richard J. Kuhn, and Janet L. Smith

Design, expression, and purification of a Flaviviridae polymerase using a high-throughput approach to facilitate crystal structure determination
Protein Sci 2004 13: 2685-2692. [Abstract] [Full Text]  

Deepshikha Datta, Nagarajan Vaidehi, Deqiang Zhang, and William A. Goddard, III

Selectivity and specificity of substrate binding in methionyl-tRNA synthetase
Protein Sci 2004 13: 2693-2705. [Abstract] [Full Text]  

K. Cecilia Engman, Anders Sandberg, Johan Leckner, and B. Göran Karlsson

Probing the influence on folding behavior of structurally conserved core residues in P. aeruginosa apo-azurin
Protein Sci 2004 13: 2706-2715. Published in Advance August 31, 2004, 10.1110/ps.04849004 [Abstract] [Full Text]  

Molly M. He, Zachary A. Wood, Walter A. Baase, Hong Xiao, and Brian W. Matthews

Alanine-scanning mutagenesis of the -sheet region of phage T4 lysozyme suggests that tertiary context has a dominant effect on -sheet formation
Protein Sci 2004 13: 2716-2724. Published in Advance August 31, 2004, 10.1110/ps.04875504 [Abstract] [Full Text]  

Mey Khalili, Jeffrey A. Saunders, Adam Liwo, Stanislaw Oldziej, and Harold A. Scheraga

A united residue force-field for calcium–protein interactions
Protein Sci 2004 13: 2725-2735. [Abstract] [Full Text] [Supplemental Research Data]  

Colleen A. McHugh, Ralph F. Tammariello, Charles B. Millard, and John H. Carra

Improved stability of a protein vaccine through elimination of a partially unfolded state
Protein Sci 2004 13: 2736-2743. Published in Advance August 31, 2004, 10.1110/ps.04897904 [Abstract] [Full Text]  

Efrosini Moutevelis and Jim Warwicker

Prediction of pK_a and redox properties in the thioredoxin superfamily
Protein Sci 2004 13: 2744-2752. Published in Advance August 31, 2004, 10.1110/ps.04804504 [Abstract] [Full Text]  

Hui-Hsu (Gavin) Tsai, Chung-Jung Tsai, Buyong Ma, and Ruth Nussinov

In silico protein design by combinatorial assembly of protein building blocks
Protein Sci 2004 13: 2753-2765. [Abstract] [Full Text] [Supplemental Research Data]  

Cinzia Verde, Barry D. Howes, M. Cristina De Rosa, Luca Raiola, Giulietta Smulevich, Richard Williams, Bruno Giardina, Elio Parisi, and Guido Di Prisco

Structure and function of the Gondwanian hemoglobin of Pseudaphritis urvillii, a primitive notothenioid fish of temperate latitudes
Protein Sci 2004 13: 2766-2781. Published in Advance August 31, 2004, 10.1110/ps.04861504 [Abstract] [Full Text]  

Renaud Vincentelli, Stéphane Canaan, Valérie Campanacci, Christel Valencia, Damien Maurin, Frédéric Frassinetti, Loréna Scappucini-Calvo, Yves Bourne, Christian Cambillau, and Christophe Bignon

High-throughput automated refolding screening of inclusion bodies
Protein Sci 2004 13: 2782-2792. [Abstract] [Full Text]  

Jim Warwicker

Improved pK_a calculations through flexibility based sampling of a water-dominated interaction scheme
Protein Sci 2004 13: 2793-2805. [Abstract] [Full Text]  

PROTEIN STRUCTURE REPORTS:

Hongfei Wang, Chie Hori Takemoto, Kazutaka Murayama, Hiroaki Sakai, Ayako Tatsuguchi, Takaho Terada, Mikako Shirouzu, Seiki Kuramitsu, and Shigeyuki Yokoyama

Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8
Protein Sci 2004 13: 2806-2810. Published in Advance August 31, 2004, 10.1110/ps.04864904 [Abstract] [Full Text]  

FOR THE RECORD:

Amy Jacobs, Kari Hartman, Thomas Laue, and Michael Caffrey

Sedimentation velocity studies of the high–molecular weight aggregates of the HIV gp41 ectodomain
Protein Sci 2004 13: 2811-2813. Published in Advance August 31, 2004, 10.1110/ps.04916704 [Abstract] [Full Text]  

Thomas U. Schwartz, Rudolf Walczak, and Günter Blobel

Circular permutation as a tool to reduce surface entropy triggers crystallization of the signal recognition particle receptor subunit
Protein Sci 2004 13: 2814-2818. Published in Advance August 31, 2004, 10.1110/ps.04917504 [Abstract] [Full Text]  

Zemin Zhang and William J. Henzel

Signal peptide prediction based on analysis of experimentally verified cleavage sites
Protein Sci 2004 13: 2819-2824. Published in Advance August 31, 2004, 10.1110/ps.04682504 [Abstract] [Full Text] [Supplemental Research Data]  

Hannes Fischer, Igor Polikarpov, and Aldo F. Craievich

Average protein density is a molecular-weight-dependent function
Protein Sci 2004 13: 2825-2828. [Abstract] [Full Text]  

Robert Schleif and Cynthia Wolberger

Arm–domain interactions can provide high binding cooperativity
Protein Sci 2004 13: 2829-2831. [Abstract] [Full Text]  

Catherine L. Swaim, David L. Smith, and Jean B. Smith

The reaction of -crystallin with the cross-linker 3,3'-dithiobis(sulfosuccinimidyl propionate) demonstrates close proximity of the C termini of A and B in the native assembly
Protein Sci 2004 13: 2832-2835. [Abstract] [Full Text]  

BOOK REVIEW:

Dan S. Tawfik

Directed enzyme evolution: Screening and selection methods. Methods in molecular biology Vol. 230 edited by Frances H. Arnold and George Georgiou. 2003.: Totowa, NJ: Humana Press. 383 pages. • Directed evolution library creation: Methods and protocols. Methods in molecular biology, Vol. 231, edited by Frances H. Arnold and George Georgiou. 2003. Totowa, NJ: Humana Press. 224 pages. • Directed molecular evolution of proteins: Or how to improve enzymes for biocatalysis, edited by Susanne Brackmann and Kay Johnsson. 2002. Weinheim, Germany: Wiley-VCH. 357 pages.
Protein Sci 2004 13: 2836-2837. [Full Text]  

CORRECTION:

CORRECTION
Protein Sci 2004 13: 2838. [Full Text]  

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