ARTICLES:

Vladimir Akoev, Edward P. Gogol, Micheal E. Barnett, and Michal Zolkiewski

Nucleotide-induced switch in oligomerization of the AAA⁺ ATPase ClpB
Protein Sci 2004 13: 567-574. [Abstract] [Full Text]  

Arezki Azzi, Shawn A. Clark, W. Ross Ellington, and Michael S. Chapman

The role of phosphagen specificity loops in arginine kinase
Protein Sci 2004 13: 575-585. [Abstract] [Full Text]  

Ilia V. Baskakov, Giuseppe Legname, Zygmunt Gryczynski, and Stanley B. Prusiner

The peculiar nature of unfolding of the human prion protein
Protein Sci 2004 13: 586-595. Published in Advance February 6, 2004, 10.1110/ps.03457204 [Abstract] [Full Text]  

Manoj Bhasin and G.P.S. Raghava

Analysis and prediction of affinity of TAP binding peptides using cascade SVM
Protein Sci 2004 13: 596-607. [Abstract] [Full Text]  

Christian Blouin, Davin Butt, and Andrew James Roger

Rapid evolution in conformational space: A study of loop regions in a ubiquitous GTP binding domain
Protein Sci 2004 13: 608-616. [Abstract] [Full Text] [Supplemental Research Data]  

Caroline M.S. Ekblad, Assaf Friedler, Dmitry Veprintsev, Richard L. Weinberg, and Laura S. Itzhaki

Comparison of BRCT domains of BRCA1 and 53BP1: A biophysical analysis
Protein Sci 2004 13: 617-625. [Abstract] [Full Text]  

Monique R. Ferguson, Xiuzhen Fan, Munia Mukherjee, Jinquan Luo, Raza Khan, Josephine C. Ferreon, Vincent J. Hilser, Robert E. Shope, and Robert O. Fox

Directed discovery of bivalent peptide ligands to an SH3 domain
Protein Sci 2004 13: 626-632. [Abstract] [Full Text]  

Nicholas C. Fitzkee and George D. Rose

Steric restrictions in protein folding: An -helix cannot be followed by a contiguous -strand
Protein Sci 2004 13: 633-639. Published in Advance February 6, 2004, 10.1110/ps.03503304 [Abstract] [Full Text]  

Grant L. Gay, Darrin A. Lindhout, and Brian D. Sykes

Using lanthanide ions to align troponin complexes in solution: Order of lanthanide occupancy in cardiac troponin C
Protein Sci 2004 13: 640-651. [Abstract] [Full Text]  

Natsuko Goda, Takeshi Tenno, Hirotoshi Takasu, Hidekazu Hiroaki, and Masahiro Shirakawa

The PRESAT-vector: Asymmetric T-vector for high-throughput screening of soluble protein domains for structural proteomics
Protein Sci 2004 13: 652-658. [Abstract] [Full Text] [Supplemental Research Data]  

Pablo Gutiérrez, Michael J. Osborne, Nadeem Siddiqui, Jean-François Trempe, Cheryl Arrowsmith, and Kalle Gehring

Structure of the archaeal translation initiation factor aIF2 from Methanobacterium thermoautotrophicum: Implications for translation initiation
Protein Sci 2004 13: 659-667. [Abstract] [Full Text]  

Lene S. Harlow, Anders Kadziola, Kaj Frank Jensen, and Sine Larsen

Crystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis and implications for its quaternary structure and tRNA binding
Protein Sci 2004 13: 668-677. Published in Advance February 6, 2004, 10.1110/ps.03477004 [Abstract] [Full Text]  

Michael J. Harms, Philip A. Wilmarth, Deborah M. Kapfer, Eric A. Steel, Larry L. David, Hans Peter Bächinger, and Kirsten J. Lampi

Laser light-scattering evidence for an altered association of B1-crystallin deamidated in the connecting peptide
Protein Sci 2004 13: 678-686. [Abstract] [Full Text]  

Matija Hedl and Victor W. Rodwell

Enterococcus faecalis mevalonate kinase
Protein Sci 2004 13: 687-693. Published in Advance February 6, 2004, 10.1110/ps.03367504 [Abstract] [Full Text]  

Chan-Hun Jung, Yu-Ran Na, and Hana Im

Retarded protein folding of deficient human ₁-antitrypsin D256V and L41P variants
Protein Sci 2004 13: 694-702. Published in Advance February 6, 2004, 10.1110/ps.03356604 [Abstract] [Full Text]  

Céline Landon, Florent Barbault, Michèle Legrain, Laure Menin, Marc Guenneugues, Valérie Schott, Françoise Vovelle, and Jean-Luc Dimarcq

Lead optimization of antifungal peptides with 3D NMR structures analysis
Protein Sci 2004 13: 703-713. [Abstract] [Full Text]  

Stephen M. Lu and Robert S. Hodges

Defining the minimum size of a hydrophobic cluster in two-stranded -helical coiled-coils: Effects on protein stability
Protein Sci 2004 13: 714-726. [Abstract] [Full Text]  

Moses Makokha, Yuanpeng Janet Huang, Gaetano Montelione, Arthur S. Edison, and Elisar Barbar

The solution structure of the pH-induced monomer of dynein light-chain LC8 from Drosophila
Protein Sci 2004 13: 727-734. Published in Advance February 6, 2004, 10.1110/ps.03462204 [Abstract] [Full Text]  

Ronald W. Peterson, P. Leslie Dutton, and A. Joshua Wand

Improved side-chain prediction accuracy using an ab initio potential energy function and a very large rotamer library
Protein Sci 2004 13: 735-751. [Abstract] [Full Text]  

Susanne Moelbert, Eldon Emberly, and Chao Tang

Correlation between sequence hydrophobicity and surface-exposure pattern of database proteins
Protein Sci 2004 13: 752-762. Published in Advance February 6, 2004, 10.1110/ps.03431704 [Abstract] [Full Text]  

Steven C. Rothman, Mark Voorhies, and Jack F. Kirsch

Directed evolution relieves product inhibition and confers in vivo function to a rationally designed tyrosine aminotransferase
Protein Sci 2004 13: 763-772. Published in Advance February 6, 2004, 10.1110/ps.03117204 [Abstract] [Full Text]  

Michael L. Sierk and William R. Pearson

Sensitivity and selectivity in protein structure comparison
Protein Sci 2004 13: 773-785. [Abstract] [Full Text]  

Sergey Sikora and Adam Godzik

Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction—The case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway
Protein Sci 2004 13: 786-796. Published in Advance February 6, 2004, 10.1110/ps.03454904 [Abstract] [Full Text]  

James Villanueva, Masaru Hoshino, Hidenori Katou, József Kardos, Kazuhiro Hasegawa, Hironobu Naiki, and Yuji Goto

Increase in the conformational flexibility of ₂-microglobulin upon copper binding: A possible role for copper in dialysis-related amyloidosis
Protein Sci 2004 13: 797-809. Published in Advance February 6, 2004, 10.1110/ps.03445704 [Abstract] [Full Text]  

Xiaoqin Wang, Johanna F. Graveland-Bikker, Cornelis G. De Kruif, and George T. Robillard

Oligomerization of hydrophobin SC3 in solution: From soluble state to self-assembly
Protein Sci 2004 13: 810-821. [Abstract] [Full Text]  

Thomas R. Weikl, Matteo Palassini, and Ken A. Dill

Cooperativity in two-state protein folding kinetics
Protein Sci 2004 13: 822-829. [Abstract] [Full Text]  

Zhengrong W. Yang, Susan W. Tendian, W. Michael Carson, Wayne J. Brouillette, Lawrence J. Delucas, and Christie G. Brouillette

Dimethyl sulfoxide at 2.5% (v/v) alters the structural cooperativity and unfolding mechanism of dimeric bacterial NAD⁺ synthetase
Protein Sci 2004 13: 830-841. [Abstract] [Full Text]  

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