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Contents: March 2005, Volume 14, Issue 3   [Index by Author] 
       ARTICLES
       PROTEIN STRUCTURE REPORTS
       FOR THE RECORD
       BOOK REVIEW
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ARTICLES:

Shannon L. Flaugh, Melissa S. Kosinski-Collins, and Jonathan King
Contributions of hydrophobic domain interface interactions to the folding and stability of human {gamma}D-crystallin
Protein Sci 2005 14: 569-581. [Abstract] [Full Text]  

Susan Idicula-Thomas and Petety V. Balaji
Understanding the relationship between the primary structure of proteins and its propensity to be soluble on overexpression in Escherichia coli
Protein Sci 2005 14: 582-592. Published in Advance February 2, 2005, 10.1110/ps.041009005 [Abstract] [Full Text] [Supplemental Research Data]  

Sungmun Lee, Kenneth Carson, Allison Rice-Ficht, and Theresa Good
Hsp20, a novel {alpha}-crystallin, prevents A{beta} fibril formation and toxicity
Protein Sci 2005 14: 593-601. [Abstract] [Full Text]  

Karen L. Maxwell, David Wildes, Arash Zarrine-Afsar, Miguel A. De Los Rios, Andrew G. Brown, Claire T. Friel, Linda Hedberg, Jia-Cherng Horng, Diane Bona, Erik J. Miller, Alexis Vallée-Bélisle, Ewan R.G. Main, Francesco Bemporad, Linlin Qiu, Kaare Teilum, Ngoc-Diep Vu, Aled M. Edwards, Ingo Ruczinski, Flemming M. Poulsen, Birthe B. Kragelund, Stephen W. Michnick, Fabrizio Chiti, Yawen Bai, Stephen J. Hagen, Luis Serrano, Mikael Oliveberg, Daniel P. Raleigh, Pernilla Wittung-Stafshede, Sheena E. Radford, Sophie E. Jackson, Tobin R. Sosnick, Susan Marqusee, Alan R. Davidson, and Kevin W. Plaxco
Protein folding: Defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins
Protein Sci 2005 14: 602-616. Published in Advance February 2, 2005, 10.1110/ps.041205405 [Abstract] [Full Text] [Supplemental Research Data]  

Joji M. Otaki, Shunsuke Ienaka, Tomonori Gotoh, and Haruhiko Yamamoto
Availability of short amino acid sequences in proteins
Protein Sci 2005 14: 617-625. Published in Advance February 2, 2005, 10.1110/ps.041092605 [Abstract] [Full Text]  

Wolfgang Rist, Fernanda Rodriguez, Thomas J.D. Jørgensen, and Matthias P. Mayer
Analysis of subsecond protein dynamics by amide hydrogen exchange and mass spectrometry using a quenched-flow setup
Protein Sci 2005 14: 626-632. Published in Advance February 2, 2005, 10.1110/ps.041098305 [Abstract] [Full Text] [Supplemental Research Data]  

Vadim Alexandrov, Ursula Lehnert, Nathaniel Echols, Duncan Milburn, Donald Engelman, and Mark Gerstein
Normal modes for predicting protein motions: A comprehensive database assessment and associated Web tool
Protein Sci 2005 14: 633-643. [Abstract] [Full Text]  

Craig M. Bertolucci, Cristina D. Guibao, and Jie Zheng
Structural features of the focal adhesion kinase–paxillin complex give insight into the dynamics of focal adhesion assembly
Protein Sci 2005 14: 644-652. Published in Advance February 2, 2005, 10.1110/ps.041107205 [Abstract] [Full Text] [Supplemental Research Data]  

Louis A. Clark
Protein aggregation determinants from a simplified model: Cooperative folders resist aggregation
Protein Sci 2005 14: 653-662. Published in Advance February 2, 2005, 10.1110/ps.041017305 [Abstract] [Full Text]  

Lu Deng, Eugene S. Vysotski, Svetlana V. Markova, Zhi-Jie Liu, John Lee, John Rose, and Bi-Cheng Wang
All three Ca2+-binding loops of photoproteins bind calcium ions: The crystal structures of calcium-loaded apo-aequorin and apo-obelin
Protein Sci 2005 14: 663-675. Published in Advance February 2, 2005, 10.1110/ps.041142905 [Full Text] [Supplemental Research Data]  

Said Eshaghi, Marie Hedrén, Marina Ignatushchenko Abdel Nasser, Tove Hammarberg, Anders Thornell, and Pär Nordlund
An efficient strategy for high-throughput expression screening of recombinant integral membrane proteins
Protein Sci 2005 14: 676-683. Published in Advance February 2, 2005, 10.1110/ps.041127005 [Abstract] [Full Text]  

Joy G. Ghosh and John I. Clark
Insights into the domains required for dimerization and assembly of human {alpha}B crystallin
Protein Sci 2005 14: 684-695. [Abstract] [Full Text]  

Sofia Giorgetti, Antonio Rossi, Palma Mangione, Sara Raimondi, Sara Marini, Monica Stoppini, Alessandra Corazza, Paolo Viglino, Gennaro Esposito, Giuseppe Cetta, Giampaolo Merlini, and Vittorio Bellotti
{beta}2-Microglobulin isoforms display an heterogeneous affinity for type I collagen
Protein Sci 2005 14: 696-702. Published in Advance February 2, 2005, 10.1110/ps.041194005 [Abstract] [Full Text]  

Patrick Hummel, Nagarajan Vaidehi, Wely B. Floriano, Spencer E. Hall, and William A. Goddard, III
Test of the Binding Threshold Hypothesis for olfactory receptors: Explanation of the differential binding of ketones to the mouse and human orthologs of olfactory receptor 912-93
Protein Sci 2005 14: 703-710. [Abstract] [Full Text] [Supplemental Research Data]  

Kengo Kinoshita and Haruki Nakamura
Identification of the ligand binding sites on the molecular surface of proteins
Protein Sci 2005 14: 711-718. Published in Advance February 2, 2005, 10.1110/ps.041080105 [Abstract] [Full Text] [Supplemental Research Data]  

Desigan Kumaran, Subramaniam Eswaramoorthy, F. William Studier, and Subramanyam Swaminathan
Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme
Protein Sci 2005 14: 719-726. [Abstract] [Full Text]  

Ji Hyun Lee and Constance J. Jeffery
The crystal structure of rabbit phosphoglucose isomerase complexed with D-sorbitol-6-phosphate, an analog of the open chain form of D-glucose-6-phosphate
Protein Sci 2005 14: 727-734. Published in Advance February 2, 2005, 10.1110/ps.041070205 [Abstract] [Full Text]  

Francesca Massi, Michael J. Grey, and Arthur G. Palmer, III
Microsecond timescale backbone conformational dynamics in ubiquitin studied with NMR R1{rho} relaxation experiments
Protein Sci 2005 14: 735-742. [Abstract] [Full Text]  

Robert Maurus, Anjuman Begum, Hsin-Hen Kuo, Andrew Racaza, Shin Numao, Carsten Andersen, Jeppe W. Tams, Jesper Vind, Christopher M. Overall, Stephen G. Withers, and Gary D. Brayer
Structural and mechanistic studies of chloride induced activation of human pancreatic {alpha}-amylase
Protein Sci 2005 14: 743-755. [Abstract] [Full Text]  

Nobukazu Nameki, Naoya Tochio, Seizo Koshiba, Makoto Inoue, Takashi Yabuki, Masaaki Aoki, Eiko Seki, Takayoshi Matsuda, Yukiko Fujikura, Miyuki Saito, Masaomi Ikari, Megumi Watanabe, Takaho Terada, Mikako Shirouzu, Mayumi Yoshida, Hiroshi Hirota, Akiko Tanaka, Yoshihide Hayashizaki, Peter Güntert, Takanori Kigawa, and Shigeyuki Yokoyama
Solution structure of the PWWP domain of the hepatoma-derived growth factor family
Protein Sci 2005 14: 756-764. Published in Advance February 2, 2005, 10.1110/ps.04975305 [Abstract] [Full Text]  

Peter Oelschlaeger, Stephen L. Mayo, and Juergen Pleiss
Impact of remote mutations on metallo-{beta}-lactamase substrate specificity: Implications for the evolution of antibiotic resistance
Protein Sci 2005 14: 765-774. [Abstract] [Full Text]  

James Sandy, Simon Holton, Elizabeth Fullam, Edith Sim, and Martin Noble
Binding of the anti-tubercular drug isoniazid to the arylamine N-acetyltransferase protein from Mycobacterium smegmatis
Protein Sci 2005 14: 775-782. [Abstract] [Full Text]  

Andreas Schroers, Oliver Hecht, Karl-Josef Kallen, Michael Pachta, Stefan Rose-John, and Joachim Grötzinger
Dynamics of the gp130 cytokine complex: A model for assembly on the cellular membrane
Protein Sci 2005 14: 783-790. [Abstract] [Full Text]  

Lei Sun, Mark Bartlam, Yiwei Liu, Hai Pang, and Zihe Rao
Crystal structure of the pyridoxal-5'-phosphate-dependent serine dehydratase from human liver
Protein Sci 2005 14: 791-798. Published in Advance February 2, 2005, 10.1110/ps.041179105 [Abstract] [Full Text]  

Alexander N. Volkov, Davide Ferrari, Jonathan A.R. Worrall, Alexandre M.J.J. Bonvin, and Marcellus Ubbink
The orientations of cytochrome c in the highly dynamic complex with cytochrome b5 visualized by NMR and docking using HADDOCK
Protein Sci 2005 14: 799-811. Published in Advance February 2, 2005, 10.1110/ps.041150205 [Abstract] [Full Text] [Supplemental Research Data]  

Liduo Yue, Fei Ye, Chunshan Gui, Haibin Luo, Jianhua Cai, Jianhua Shen, Kaixian Chen, Xu Shen, and Hualiang Jiang
Ligand-binding regulation of LXR/RXR and LXR/PPAR heterodimerizations: SPR technology-based kinetic analysis correlated with molecular dynamics simulation
Protein Sci 2005 14: 812-822. [Abstract] [Full Text] [Supplemental Research Data]  

PROTEIN STRUCTURE REPORTS:

Mutsuko Kukimoto-Niino, Rie Shibata, Kazutaka Murayama, Hiroaki Hamana, Madoka Nishimoto, Yoshitaka Bessho, Takaho Terada, Mikako Shirouzu, Seiki Kuramitsu, and Shigeyuki Yokoyama
Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 Å resolution
Protein Sci 2005 14: 823-827. Published in Advance February 2, 2005, 10.1110/ps.041229405 [Abstract] [Full Text]  

FOR THE RECORD:

Surajit Bhattacharjya, Ping Xu, Mukundan Chakrapani, Linda Johnston, and Feng Ni
Polymerization of the SAM domain of MAPKKK Ste11 from the budding yeast: Implications for efficient signaling through the MAPK cascades
Protein Sci 2005 14: 828-835. Published in Advance February 2, 2005, 10.1110/ps.041122105 [Abstract] [Full Text]  

Salem Faham, Gabriella L. Boulting, Elizabeth A. Massey, Sarah Yohannan, Dawn Yang, and James U. Bowie
Crystallization of bacteriorhodopsin from bicelle formulations at room temperature
Protein Sci 2005 14: 836-840. Published in Advance February 2, 2005, 10.1110/ps.041167605 [Abstract] [Full Text]  

BOOK REVIEW:

Lars-Oliver Essen
Membrane protein protocols: Expression, purification and characterization, edited by Barry S. Selinsky. 2003.: Humana Press. $99.50.
Protein Sci 2005 14: 841. [Full Text]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.


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