ARTICLES:

James S. Butler and Stewart N. Loh

Folding and misfolding mechanisms of the p53 DNA binding domain at physiological temperature
Protein Sci 2006 15: 2457-2465. Published in Advance September 25, 2006, 10.1110/ps.062324206 [Abstract] [Full Text] [PDF]  

Zsolt Keresztessy, Éva Csosz, Jolán Hársfalvi, Krisztián Csomós, Joe Gray, Robert N. Lightowlers, Jeremy H. Lakey, Zoltán Balajthy, and László Fésüs

Phage display selection of efficient glutamine-donor substrate peptides for transglutaminase 2
Protein Sci 2006 15: 2466-2480. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Neil Ranson, Thusnelda Stromer, Luc Bousset, Ronald Melki, and Louise C. Serpell

Insights into the architecture of the Ure2p yeast protein assemblies from helical twisted fibrils
Protein Sci 2006 15: 2481-2487. Published in Advance September 25, 2006, 10.1110/ps.062215206 [Abstract] [Full Text] [PDF]  

Puttur Santhoshkumar and K. Krishna Sharma

Conserved F84 and P86 residues in B-crystallin are essential to effectively prevent the aggregation of substrate proteins
Protein Sci 2006 15: 2488-2498. [Abstract] [Full Text] [PDF]  

Taner Z. Sen, Haitao Cheng, Andrzej Kloczkowski, and Robert L. Jernigan

A Consensus Data Mining secondary structure prediction by combining GOR V and Fragment Database Mining
Protein Sci 2006 15: 2499-2506. Published in Advance September 25, 2006, 10.1110/ps.062125306 [Abstract] [Full Text] [PDF]  

Min-yi Shen and Andrej Sali

Statistical potential for assessment and prediction of protein structures
Protein Sci 2006 15: 2507-2524. [Abstract] [Full Text] [PDF]  

David Talavera, Antonio Morreale, Tim Meyer, Adam Hospital, Carles Ferrer-Costa, Josep Lluis Gelpi, Xavier de la Cruz, Robert Soliva, F. Javier Luque, and Modesto Orozco

A fast method for the determination of fractional contributions to solvation in proteins
Protein Sci 2006 15: 2525-2533. Published in Advance September 25, 2006, 10.1110/ps.062406706 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Naoya Tochio, Seizo Koshiba, Naohiro Kobayashi, Makoto Inoue, Takashi Yabuki, Masaaki Aoki, Eiko Seki, Takayoshi Matsuda, Yasuko Tomo, Yoko Motoda, Atsuo Kobayashi, Akiko Tanaka, Yoshihide Hayashizaki, Takaho Terada, Mikako Shirouzu, Takanori Kigawa, and Shigeyuki Yokoyama

Solution structure of the kinase-associated domain 1 of mouse microtubule-associated protein/microtubule affinity-regulating kinase 3
Protein Sci 2006 15: 2534-2543. [Abstract] [Full Text] [PDF]  

Daniel Trzesniak and Wilfred F. van Gunsteren

Catalytic mechanism of cyclophilin as observed in molecular dynamics simulations: Pathway prediction and reconciliation of X-ray crystallographic and NMR solution data
Protein Sci 2006 15: 2544-2551. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Hee-Chul Ahn, Yen T.H. Le, Partha S. Nagchowdhuri, Eugene F. DeRose, Cindy Putnam-Evans, Robert E. London, John L. Markley, and Kwang Hun Lim

NMR characterizations of an amyloidogenic conformational ensemble of the PI3K SH3 domain
Protein Sci 2006 15: 2552-2557. Published in Advance September 25, 2006, 10.1110/ps.062154306 [Abstract] [Full Text] [PDF]  

Pernille Haste Andersen, Morten Nielsen, and Ole Lund

Prediction of residues in discontinuous B-cell epitopes using protein 3D structures
Protein Sci 2006 15: 2558-2567. Published in Advance September 25, 2006, 10.1110/ps.062405906 [Abstract] [Full Text] [PDF]  

Olga K. Baryshnikova and Brian D. Sykes

Backbone dynamics of SDF-1 determined by NMR: Interpretation in the presence of monomer–dimer equilibrium
Protein Sci 2006 15: 2568-2578. [Abstract] [Full Text] [PDF]  

Garry W. Buchko, Shuisong Ni, Howard Robinson, Eric A. Welsh, Himadri B. Pakrasi, and Michael A. Kennedy

Characterization of two potentially universal turn motifs that shape the repeated five-residues fold—Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142
Protein Sci 2006 15: 2579-2595. [Abstract] [Full Text] [PDF]  

Charles Dumont, Yoshitaka Matsumura, Seung Joong Kim, Jinsong Li, Elena Kondrashkina, Hiroshi Kihara, and Martin Gruebele

Solvent-tuning the collapse and helix formation time scales of _6-85^*
Protein Sci 2006 15: 2596-2604. [Abstract] [Full Text] [PDF]  

Aditya Hindupur, Deqian Liu, Yonghong Zhao, Henry D. Bellamy, Mark A. White, and Robert O. Fox

The crystal structure of the E. coli stress protein YciF
Protein Sci 2006 15: 2605-2611. Published in Advance September 25, 2006, 10.1110/ps.062307706 [Abstract] [Full Text] [PDF]  

Cy M. Jeffries, Stephen C. Graham, Philippa H. Stokes, Charles A. Collyer, J. Mitchell Guss, and Jacqueline M. Matthews

Stabilization of a binary protein complex by intein-mediated cyclization
Protein Sci 2006 15: 2612-2618. Published in Advance September 25, 2006, 10.1110/ps.062377006 [Abstract] [Full Text] [PDF]  

Guido Kaulmann, Gottfried J. Palm, Klaus Schilling, Rolf Hilgenfeld, and Bernd Wiederanders

The crystal structure of a Cys25 Ala mutant of human procathepsin S elucidates enzyme–prosequence interactions
Protein Sci 2006 15: 2619-2629. [Abstract] [Full Text] [PDF]  

John D. Larson, Jermaine L. Jenkins, Jonathan P. Schuermann, Yuzhen Zhou, Donald F. Becker, and John J. Tanner

Crystal structures of the DNA-binding domain of Escherichia coli proline utilization A flavoprotein and analysis of the role of Lys9 in DNA recognition
Protein Sci 2006 15: 2630-2641. Published in Advance September 25, 2006, 10.1110/ps.062425706 [Abstract] [Full Text] [PDF]  

Thu Zar Lwin and Ray Luo

Force field influences in -hairpin folding simulations
Protein Sci 2006 15: 2642-2655. [Abstract] [Full Text] [PDF]  

Sabine R. Quadt-Akabayov, Jordan H. Chill, Rina Levy, Naama Kessler, and Jacob Anglister

Determination of the human type I interferon receptor binding site on human interferon-2 by cross saturation and an NMR-based model of the complex
Protein Sci 2006 15: 2656-2668. Published in Advance September 25, 2006, 10.1110/ps.062283006 [Abstract] [Full Text] [PDF]  

FOR THE RECORD:

Lisa N. Kinch and Nick V. Grishin

Longin-like folds identified in CHiPS and DUF254 proteins: Vesicle trafficking complexes conserved in eukaryotic evolution
Protein Sci 2006 15: 2669-2674. [Abstract] [Full Text] [PDF]  

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